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Sep 19, 2015 at 5:00 comment added Fomite @Ilya Yet you could obtain the figure using base graphics - a scatter plot is a scatter plot.
Sep 18, 2015 at 9:38 comment added ikashnitsky @Fomite No)) The idea is to cite everything that is needed for reproducibility. You cannot obtain the figure you use in the paper without ggplot2, but you can easily reproduce the analysis without Git
Sep 18, 2015 at 3:27 comment added Fomite @Ilya Except this will rapidly become cumbersome. Do I cite Git? matplotlib? Numpy, because I really like their CSV export function? Requests, because its how I pull down a config file off Github to make sure I'm always using the current one?
Sep 17, 2015 at 9:16 comment added ikashnitsky @Fomite I don't agree. It is crucial to pay credit to those who contributed their time helping others. Also, I think, you should mention all the packages used for reproducibility.
Sep 12, 2015 at 22:23 comment added Fomite @Ilya Honestly, I don't think I would, unless there was something fundamental about ggplot2 that enabled the analysis.
Sep 12, 2015 at 21:48 comment added ikashnitsky How would you cite ggplot2?
Sep 12, 2015 at 21:37 vote accept ikashnitsky
Sep 12, 2015 at 21:28 history answered jakebeal CC BY-SA 3.0