Suppose we define an acronym in a scientific paper.
Should we do it like this?
(...) We call this approach the First Output Once (FOO) (...)
Or like this?
(...) We call this approach the first output once (FOO) (...)
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Sign up to join this communitySuppose we define an acronym in a scientific paper.
Should we do it like this?
(...) We call this approach the First Output Once (FOO) (...)
Or like this?
(...) We call this approach the first output once (FOO) (...)
It doesn't really matter. Pick the option you prefer, and then the important thing is to be consistent throughout the whole paper.
Capitalisation where you wouldn’t expect it orthographically is irritating and breaks the reading flow, so I would avoid it whenever possible.
Rarely, it can be helpful to clarify where your acronym comes from by typographically emphasising the respective letters, but capitalisation is no common emphasis (except for all caps, but that doesn’t work here). Rather I would use boldface. It is clearly emphasising without breaking any spelling rules or similar:
We call this approach first output once (FOO).
This has the advantage that it also works if your acronym contains lowercase letters, stands for proper names, other acronyms, and similar. For example:
We call this directed asynchronous Monte Carlo lesson (DAMoCLes)
(Note that I would opt for no emphasis at all in either example, but then they are obviously just examples.)
As mentioned by others, there is no definitive rule (except if defined by the journal). However, let me give you a reason for and against capitalization.
On the one hand, capitalization makes it clearer and easier to see what the acronym stands for. Especially if the acronym is long or uses multiple letters from the same word, capitalization can be useful.
However, I have seen referees see capitalization as "condescending" to the reader, in the sense that it implies that the reader could not have figured out what the acronym stands for without it.
You capitalize the initial letters of a proper noun. There is no rule that you would capitalize letters merely because you want to make an initialism out of them. You may be getting confused because long proper nouns are often turned into initialisms. It is only proper nouns that are capitalized.