Questions related to various reference/citation management software used for recording and utilising bibliographic citations.

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0answers
12 views

How do I reorder notes in readcube? [on hold]

My question relates to readcube's ability to have notes on the side of your pdf. The only problem is that it throws a timestamp on it and it doesn't arrange them by page, but in the order you made ...
1
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2answers
22 views

Endnote outputting mixed citation styles in same document

I am having problems with Endnote outputting a mix of citation styles (or possibly a broken citation style!) in the same document, despite applying the Endnote Frontiers Science style (official, from ...
3
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1answer
139 views

'Scholarly' alternatives to Goodreads

As you can read on Wikipedia, Goodreads is an Amazon company and "social cataloging" website founded in December 2006 and launched in January 2007 by Otis Chandler, a software engineer and ...
0
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2answers
95 views

Searching for open source literature management software [duplicate]

I recently started my PhD and now try to find a convenient software for managing my literature research. What I want it to be able to do is: Let me highlight PDFs Add notes to PDFs Add tags to my ...
-1
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3answers
123 views

Fastest way to download thousands of reference records [closed]

Good day people, I was wondering how to donwload thousands (>500k) of references records at once or through a software or script and not 500 at each time. Thank so much in advance for any clue.
9
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3answers
750 views

Why should I format a citation manually without bibliographic software?

During a lecture (and a separate presentation) my instructor told us about bibliographic software, how it composes references automatically and is able to correctly cite articles in many formats. The ...
5
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1answer
215 views

How can I migrate a library from Calibre to Zotero?

I've got a well organized Calibre library, but due to full text PDF search, web clipping and basic bibliography management, I decided to move to Zotero. I can import .bib records easily, but is ...
3
votes
1answer
66 views

What is the reference manager that can show the list of annotations?

I am using Mendeley to organize, highlight and to synchronize my references. I think a feature where you can see a list of annotations/highlight that you have made will be extremely useful during ...
0
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2answers
105 views

Mendeley - add notes to research

I am using mendeley to save papers etc. which have come up during my research. However, I am often having some ideas about problems which are interesting or some links which are worth reading later. I ...
0
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0answers
49 views

Reference management software that allows users to build their keyword synonym list

Do you know of any reference management software other than Reference Manager which allows users to create keyword synonym groups (e.g. aspirin=acetylsalicylate) and use them to retrieve references ...
3
votes
1answer
94 views

Relational Reference Management Software?

I'm looking for a reference management program to do three things: (1) Manage references. There are plenty of solutions for this. (2) Manage quotations. Similar to this question, whose suggestions ...
1
vote
1answer
177 views

Fastest way to browse journal papers (from Web of Science)?

The search engine which I typically use to browse journal papers is WebofScience. It allows me to sort by times cited, and check out who cited what. The problem is that to get to the actual article ...
1
vote
1answer
102 views

How do you deal with many many authors for many sections and equally many subsections in a collection?

I have found one source which is a collection which contains several hundreds of subsections with easily 100 authors I presume. It's a textbook on synthetic material. The bean counter I am, I ...
10
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4answers
449 views

How to automatically link LaTeX .bib references to a set of pdf full-text articles?

I have a huge collection of PDFs of research papers. Many of these have valuable annotations. I also have a huge .bib file containing citations for these and many other works. Is there a reference ...
1
vote
1answer
103 views

Can I rearrange the given names of authors in Pubmed for importing to EndNote?

When viewing a Pubmed citation, author names are listed in the format Surname Initial Initial. This means that when I am inputting a citation into EndNote I have to either type the names in manually ...
0
votes
1answer
112 views

Automatically, and freely, download PDFs for a set of references

In EndNote, I know there's an option to automatically download PDF files for the references you have in your library. Is there any way to do the same thing in some kind of non-commercial software, ...
9
votes
3answers
391 views

Is there an open source tool for producing bibtex entries from paper PDFs?

In the desktop application for Mendeley, it's possible to import a PDF and have the bibliographic data automatically extracted (or perhaps looked up, I'm not sure). This feature is more or less ...
4
votes
1answer
140 views

How to automatically import APA references into reference manager?

Related to this question on cross-checking APA citations and references, I often have an existing list of APA formatted references. This might come from a document from a collaborator or it might just ...
6
votes
2answers
271 views

How to check citations and references match in a manually prepared document with APA author (year) citations?

I like to use bibliographic software (e.g., Endnote, BibTex, etc.) to manage my references. However, sometimes I am working on an existing article that has been written with APA citations and ...
14
votes
1answer
403 views

Map (tree) of citations/references

I was wondering if there already exists a software/service that allows to build a tree of references/citing articles starting from a selected paper X. For example paper X has a list of references, ...
8
votes
2answers
140 views

Literature management for workgroups

We are looking for a solution to manage our literature (citations and corresponding PDFs) in our workgroup (~15 persons). Everybody should have read-write access, so a solution having a shared library ...
8
votes
2answers
5k views

How does ReadCube compare to Mendeley?

Currently I use Mendeley. I have heard some stuff about ReadCube, but they don't have a Mendeley quick import tool, so… before I go through the hassle of resetting up my library with them, I wondered ...
10
votes
4answers
1k views

Should I use reference manager software?

Should I use software for managing my references? What is the benefit of it? I can write down the references by myself, so I'm not sure what the benefit is.
9
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5answers
198 views

Is there a community driven unified article database?

I am using Mendeley to keep track of my papers. It allows me to group the papers in folders, and I can easily export BiBTeX for a folder which I can include in a paper I am writing. However, almost ...
2
votes
2answers
220 views

Is there any reference management software that supports hierarchical tagging?

At the moment I'm using Zotero to organize my paper collection and for my current work I'm very happy with it's possobilities to organize content (folders and tags). However, working on bigger ...
10
votes
2answers
280 views

Does using a bibliography software actually save you time aside from when converting citation style?

Does using a bibliography software actually save you time aside from when converting citation style? I have used refworks and endnote for years and from 3 years ago I decided to ditch them both and ...
10
votes
3answers
445 views

Searching for a quotation manager

I’m looking for a way to manage the text of the quotations that most certainly I will use (i.e. quote) in the future. I’m a philosopher, so this is specially handy —and even required— for the ...
28
votes
6answers
4k views

Free, open-source substitutes for Mendeley?

Mendeley is (mainly) a proprietary social network to share basic citation data and research papers. see also Are there any free and open source substitutes for this service? A technical ...
5
votes
2answers
88 views

Is there any referencing style analyzer?

As different journals and Conference proceedings have different reference styles, it is very much important to quickly identify the specific reference style they prefer. To do this, is there any ...
10
votes
1answer
527 views

Organizing my reading list in Mendeley

I keep publications from the literature in Mendeley for later reading on my iPad. There are many publications, so I need some sort of way of prioritizing the ones I need to read first versus the ones ...
4
votes
1answer
70 views

Identifying new references when appending to existing reference list

I am building a database from several online sources like Engineering Village. Everyday I am searching different/close/related keywords that pertains to my research topic. Then, I am (everyday) ...
10
votes
3answers
342 views

Batch editing references

I imported many pdf articles into Mendeley but saw that Mendeley did not capture all the fields correctly. So, I needed to change them manually. It would be a tedious job to do so with many documents. ...
11
votes
3answers
303 views

How can I get the DOI of a paper from its title?

Is there a way to get the DOI (Document Object Identifier) of a research paper when its title is available? I am preparing a reference database I could not get the URL of all the references. So, I ...
22
votes
8answers
1k views

Keeping track of bibliography references for an entire research group

This is a related question to my previous one about keeping advisees aware of literature. Given the relatively large number of papers that are out there, it's inadvisable to force every student to ...
28
votes
10answers
3k views

Tool to manage and/or make available a list of my publications on the web?

This some kind of follow up question to How to prevent plagiarism of my papers?, since I've been clearly convinced that it was in my best interest to put my own papers on my webpage. Now, since I ...
11
votes
2answers
461 views

Is it worth to switch from Bibsonomy to Mendeley?

What are the advantages of Mendeley over Bibsonomy? Is it easy to migrate from Bibsonomy to Mendeley? Does Mendeley offer equally powerful bibliography exportation? In detail, the following ...