Questions concerning "Open Science", or research done in full view of the public eye, with a focus on accessibly and reproducibility, including tools to enable such access.

learn more… | top users | synonyms

5
votes
2answers
394 views

Does any university require students to release their source code in order to graduate?

I wonder whether there is any university that requires students to release their source code (or at least part of it) in order to obtain their PhD.
0
votes
2answers
113 views

Multiple outlets publication

Perhaps, it's a naive question, but I'd like to have some clarification of my own thoughts on the subject. I'm curious about what is the rationale or need of 1) transferring copyright from authors of ...
4
votes
2answers
134 views

Are there any academic data sets that force users to release any source code written to analyse them?

I am curious to know whether there exists any data set that forces users to publicly release any source code written to analyse it.
12
votes
4answers
1k views

How much effort do researchers take to publish their source code?

When publishing a paper, some researchers publish the source code used for the paper. Is there any research/study/survey/... that looked at how much effort do researchers take to publish their source ...
2
votes
1answer
95 views

Is it inappropriate to share journal article reviews?

I want to put the LaTeX source files for a paper that I just published up on GitHub (technically they are already there, but private). Is it inappropriate to include the (anonymous) reviews and my ...
18
votes
1answer
465 views

Getting a dump of arXiv metadata

Prompted by discussion in this post on Meta.MathOverflow.net I got interested in comparing usage of tags from MathOverflow to submissions in the respective disciplines of arXiv. (Vide a similar idea ...
6
votes
1answer
114 views

How should I split my code and data between an open repository and the article's supplementary files?

I am working on a paper that involves some data and a piece of code to analyse the data. I want the results of the analysis to be reproducible and the code to be open. This concept of "reproducible ...
1
vote
1answer
174 views

Reference on the time it takes for a source code used for a research article to be released

Is there any research/study/survey/... that looked at how much time it takes for the authors of a research article to release the source code? Ideally I'm looking for an approximation distribution. ...
7
votes
2answers
207 views

Pedagogical pros and cons of requiring undergraduate students to follow open/reproducible research practices?

I regularly teach an undergraduate course in which students are expected to complete projects that involve writing code. I also supervise undergraduates in other project and thesis work that involve ...
8
votes
1answer
622 views

Reference on availability of source code used in computer science research articles?

I have several questions related to open-sourcing the source code used for a research article. Is there any research/study that addresses any of the following: What percentage of research articles ...
6
votes
1answer
190 views

Are there any researcher digital identification services or directories, similar to ORCID and ResearcherID?

Are there any general (not field-specific) researcher digital identification services or directories, similar to ORCID and ResearcherID?
5
votes
1answer
146 views

Is there a benefit to registering digital identification via both ORCID and ResearcherID?

This question is in continuation to the discussion from about a year ago, concerning researcher digital identification: Why use unique digital researcher ID?. It appears that researchers, who would ...
2
votes
2answers
205 views

Flair/Badge for arXiv paper?

This is borderline trivial, but in my attempt to publish my work in a public repository, I've found badges at the top of my README.md to be useful. For example, using Zenodo, I can create a badge that ...
9
votes
2answers
221 views

Are there any journals or conferences that take into account the availability of the source code when selecting the papers to publish?

Quite too many times I have read in a research article claiming that the source code will be made available, and, when I look for it, it turns out that the source code still hasn't been released. Are ...
0
votes
1answer
116 views

Is there a proper format to cite open source software? [duplicate]

In my research I used a lot python libraries that I need to cite, I wonder if there is an accepted format for citing open-source software? Do I just put them together with all other references? Do I ...
3
votes
2answers
226 views

What software license allows me to have GPL for academic use and paid use by industry for my open-source project?

I have spend many years during my PhD developing a code base and decided to open-source the code when I finished. It's currently under GPL. The code is used by many different research group around the ...
9
votes
5answers
203 views

Are there any proposals to make sharing code and data with publications a requirement?

Depending on the project, many researchers have to rewrite code and reproduce datasets from previous works in order to perform experimental evaluations. Although some dataset are understood to contain ...
2
votes
1answer
74 views

Which licence choose for a new academic computing language?

Disclaimer: I am not sure this is the right place to ask the question, but since it is directly related to academic work, I though I'll give it a try. If it is not, please feel free to redirect ...
6
votes
2answers
438 views

How would you decide to publish (or not) in F1000Research or other journals with alternative peer-review methods?

As pointed out by altmetrics, “Peer-review has served scholarship well, but is beginning to show its age. It is slow, encourages conventionality, and fails to hold reviewers accountable.” Not all ...
31
votes
6answers
3k views

Should I write a paper on open-source software I've built?

I have been fairly active in the open-source software community with a few projects that have gotten some attention. However, my reputation in the academic/publications world is a little bit low and ...
1
vote
1answer
108 views

What are issues to consider when making your code for an experimental paradigm, which was conceived by someone else, publicly available?

General background In the cognitive sciences, it is often necessary to program/script experimental paradigms to conduct your studies. Basically, these programs present stimuli and collect responses, ...
16
votes
2answers
783 views

When can I safely use CC-BY license on arXiv?

On arXiv one can license a preprint on one of the following (see also a note on arXiv on licenses): arXiv.org perpetual, non-exclusive license to distribute this article (Minimal rights required by ...
23
votes
4answers
377 views

What are the disadvantages of opening the source of your own science tools

I am currently finishing my PhD thesis and, as a great deal of the job was to create tools and protocoles, I am considering putting the different scripts I wrote on open source directories (such as ...
8
votes
2answers
333 views

Releasing one version of a Scientific Paper under an Open License

I am going to release a Technical Report that will be archived and made available online by the university's library. An abridged version of the work was accepted by a peer-reviewed conference and ...
28
votes
1answer
457 views

How to communicate achievements on the StackExchange network in an academic CV or job interview?

I think contributions to StackExchange constitute a valuable thing for an academic to do. In many cases such contributions are directly related to the aims of an academic department: community ...
14
votes
4answers
220 views

Scientific hackathons or other intense voluntary bottom-up events

In programming there are many hackathons - intense voluntary one day-week events, where participants collaboratively attack problems. They may be proposed by a company, NGO, participants or a group; ...